Amira is a powerful, multifaceted software platform for visualizing, manipulating, and understanding Life Science and bio-medical data coming from all types of sources and modalities.
Import and Export
Process

• 2D and 3D image filtering
• Surface generation
• FEM grid generation
• Interactive and automatic segmentation
• Interactive and automatic slice alignment
• Image registration and morphing
• Tensor computation
• Skeletonization and tracing of neural and vascular networks
• Deconvolution and Z-drop correction
• Powerful scripting interface
• Dedicated editors for segmentation, tracing and fusion

Visualize

• Orthogonal and oblique slicing
• Volume rendering
• Surface rendering
• Isolines and isosurfaces
• Multichannel imaging
• Image fusion
• Vector and tensor visualization
• Structured network visualization
• Support of structured / unstructured grids
• Molecular simulation and visualization

Analyze

• Volume, area, and distance measurements
• Densitometry (gray value statistics)
• Filament network statistics
• Co-localization analysis
• Component separation and counting
• Arithmetic operations on images, vector fields, and unstructured
  grids
• Direct integration of the MATLAB^® compute engine

Present

• Easy-to-use interactive 3D navigation
• Automation of complex animations and demonstrations
• Embedded tools for movie generation
• Active and passive 3D stereo vision
• Virtual reality navigation tools
• Single and tiled screen display
• Single or multipipe rendering
• Support for tracked input devices
• Support for auto-stereoscopic displays