Publications
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Ma L, Rathgeb A, Mubarak H, Tran M, Fei B. Unsupervised super-resolution reconstruction of hyperspectral histology images for whole-slide imaging. Journal of biomedical optics. 2022 May 1;27(5):056502-.
Ma_2022_JBO_SuperRes_Reconstruction_WSI [PubMed] [PDF] [DOI] -
Young J, Shahedi M, Dormer JD, Johnson B, Gahan J, Fei B. A low-cost PVC-based dual-modality kidney phantom. In Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling 2022 Apr 4 (Vol. 12034, pp. 639-647). SPIE.
Fei_2022_SPIE_Young_Kidney_Phantom [PubMed] [PDF] [DOI] -
Zhou X, Ma L, Mubarak HK, Little JV, Chen AY, Myers LL, Sumer BD, Fei B. Automatic detection of head and neck squamous cell carcinoma on pathologic slides using polarized hyperspectral imaging and deep learning. In Medical Imaging 2022: Digital and Computational Pathology 2022 Apr 4 (Vol. 12039, pp. 91-100). SPIE.
Fei_2022_SPIE_Ximing_PHSI_Histology [PubMed] [PDF] [DOI] -
Chaudhary U, Leitch K, Chhabra A, Kohli A, Fei B. Deep learning-based abdominal muscle segmentation on CT images of surgical patient populations. In Medical Imaging 2022: Biomedical Applications in Molecular, Structural, and Functional Imaging 2022 Apr 4 (Vol. 12036, pp. 453-459). SPIE.
Fei_2022_SPIE_Usamah_CT_Segmentation [PubMed] [PDF] [DOI] -
Pathour T, Akter N, Dormer JD, Chaudhary S, Fei B, Sirsi S. Identifying unique acoustic signatures from chemically-crosslinked microbubble clusters using deep learning. In Medical Imaging 2022: Ultrasonic Imaging and Tomography 2022 Apr 4 (Vol. 12038, pp. 128-136). SPIE.
Fei_2022_SPIE_Teja_Ultrasound_DL [PubMed] [PDF] [DOI] -
Shi T, Shahedi M, Caughlin K, Dormer JD, Ma L, Fei B. Semi-automated three-dimensional segmentation for cardiac CT images using deep learning and randomly distributed points. In Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling 2022 Apr 4 (Vol. 12034, pp. 424-430). SPIE.
Fei_2022_SPIE_Ted_Cardiac_Segmentation [PubMed] [PDF] [DOI] -
Bettati P, Dormer JD, Shahedi M, Fei B. An augmented reality-assisted visualization system for potential applications in prostate biopsy. In Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling 2022 Apr 4 (Vol. 12034, pp. 577-582). SPIE.
Fei_2022_SPIE_Patric_AR_prostate [PubMed] [PDF] [DOI] -
Tran MH, Ma L, Litter JV, Chen AY, Fei B. Thyroid carcinoma detection on whole histologic slides using hyperspectral imaging and deep learning. In Medical Imaging 2022: Digital and Computational Pathology 2022 Apr 4 (Vol. 12039, pp. 101-111). SPIE.
Fei_2022_SPIE_Minh_HSI_Histology [PubMed] [PDF] [DOI] -
Shahedi M, Dormer JD, Do QN, Xi Y, Lewis MA, Herrera CL, Spong CY, Madhuranthakam AJ, Twickler DM, Fei B. Automatic segmentation of uterine cavity and placenta on MR Images using deep learning. In Medical Imaging 2022: Biomedical Applications in Molecular, Structural, and Functional Imaging 2022 Apr 4 (Vol. 12036, pp. 287-293). SPIE.
Fei_2022_SPIE_Maysam_Placenta_Segmentation [PubMed] [PDF] [DOI] -
Ma L, Rathgeb A, Tran M, Fei B. Unsupervised super resolution network for hyperspectral histologic imaging. In Medical Imaging 2022: Digital and Computational Pathology 2022 Apr 4 (Vol. 12039, pp. 149-159). SPIE.
Fei_2022_SPIE_Ling_HSI_Super_Resolution [PubMed] [PDF] [DOI] -
Leitch K, Shahedi M, Dormer JD, Do QN, Xi Y, Lewis MA, Herrera CL, Spong CY, Madhuranthakam AJ, Twickler DM, Fei B. Placenta accreta spectrum and hysterectomy prediction using MRI radiomic features. In Medical Imaging 2022: Computer-Aided Diagnosis 2022 Apr 4 (Vol. 12033, pp. 394-399). SPIE.
Fei_2022_SPIE_KaToria_Placenta_Radiomics [PubMed] [PDF] [DOI] -
Leitch K, Halicek M, Shahedi M, Little JV, Chen AY, Fei B. Detecting aggressive papillary thyroid carcinoma using hyperspectral imaging and radiomic features. In Medical Imaging 2022: Computer-Aided Diagnosis 2022 Apr 4 (Vol. 12033, pp. 537-544). SPIE.
Fei_2022_SPIE_KaToria_HSI_Thyroid_Radiomics [PubMed] [PDF] [DOI] -
Huang J, Guo J, Pedrosa I, Fei B. Deep learning-based deformable registration of dynamic contrast enhanced MR images of the kidney. In Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling 2022 Apr 4 (Vol. 12034, pp. 213-222). SPIE.
Fei_2022_SPIE_Huang_Kidney_Segmentation [PubMed] [PDF] [DOI] -
Dormer JD, Villordon M, Shahedi M, Do QN, Xi Y, Lewis MA, Madhuranthakam AJ, Herrera CL, Spong CY, Twickler DM, Fei B. CascadeNet for hysterectomy prediction in pregnant women due to placenta accreta spectrum. In Medical Imaging 2022: Image Processing 2022 Apr 4 (Vol. 12032, pp. 156-164). SPIE.
Fei_2022_SPIE_Dormer_Placenta_Cascade_Net [PubMed] [PDF] [DOI] -
Ma L, Little JV, Chen AY, Myers L, Sumer BD, Fei B. Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging. Journal of Biomedical Optics. 2022 Apr;27(4):046501.
Fei_2022_Ling_JBO_HSI_Histology [PubMed] [PDF] [DOI] -
Modir N, Shahedi M, Dormer J, Ma L, Ghaderi M, Sirsi S, Cheng YS, Fei B. LED-based hyperspectral endoscopic imaging. In Optical Biopsy XX: Toward Real-Time Spectroscopic Imaging and Diagnosis 2022 Mar 2 (Vol. 11954, pp. 47-58). SPIE.
Fei_2022_Photoncis_Naeeme_LED_Endoscope [PubMed] [PDF] [DOI] -
Ayala L, Isensee F, Wirkert SJ, Vemuri AS, Maier-Hein KH, Fei B, Maier-Hein L. Band selection for oxygenation estimation with multispectral/hyperspectral imaging. Biomedical Optics Express. 2022 Mar 1;13(3):1224-42.
Fei_2022_BOE_Band_Selection [PubMed] [PDF] [DOI] -
Reilly CM, Higgins M, Butler J, Esiashvili N, Fei B, Flynn T, Dormer JD, Schreibmann E. The Contribution of Thoracic Radiation Dose Volumes to Subsequent Development of Cardiovascular Disease in Cancer Survivors. Journal of Cardiovascular Nursing. 2022 Mar 24.
Fei_2021_RadOn_Cancer_Radiomics [PubMed] [PDF] [DOI] -
Mehta R, Filos A, Baid U, Sako C, McKinley R, Rebsamen M, Dätwyler K, Meier R, Radojewski P, Murugesan GK, Nalawade S, Fei B. QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation-Analysis of Ranking Scores and Benchmarking Results. Journal of Machine Learning for Biomedical Imaging. 2022;1.
Mehta_2022_MICCAI [PubMed] [PDF] -
Shahedi M, Dormer JD, Halicek M, Fei B. The effect of image annotation with minimal manual interaction for semiautomatic prostate segmentation in CT images using fully convolutional neural networks. Medical physics. 2022 Feb;49(2):1153-60.
Fei_2021_MP_Maysam_CT_Segmentation [PDF]