Publications
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Halicek M, Little JV, Wang X, Patel M, Griffith CC, El-Diery MW, Chen AY, Fei BW (Corresponding author). Optical biopsy of head and neck cancer using hyperspectral imaging and convolution neural networks. Proceedings of SPIE: The Internation Society for Optical Engineering;10469.
Halicek_2018_SPIE [PubMed] [PDF] [DOI] -
Mei KQ, Hu B, Fei BW, Qin BJ. Phase asymmetry guided adaptive fractional-order total variation and diffusion for feature-preserving ultrasound despeckling. arXiv:1810.12538.
Mei_2018_arXiv [PDF] -
Manzoor S, Ahmed S, Ali A, Han KH, Sechopoulos I, O’Neill A, Fei BW, O’Neill WC. Progression of medial arterial calcification in CKD. Kidney International Reports;3(6):1328-1335.
Manzoor_2018_Kidney [PubMed] [PDF] [DOI] -
Akin-Akintayo O, Tade, F, Mittal P, Moreno C, Nieh PT, Rossi P, Patil D, Halkar R, Fei BW, Master VA, Jani AB, Kitajima H, Osunkoya AO, Ormenisan-Gherasim C, Goodman MM, Schuster, DM. Prospective evaluation of fluciclovine (18F) PET-CT and MRI in detection of recurrent prostate cancer in non-prostatectomy patients. European Journal of Radiology;102:1-8.
AkinAkintayo_2018_EuJOR [PubMed] [PDF] [DOI] -
Tian Z, Liu L, Zhang Z, Fei BW (Corresponding author). PSNet: prostate segmentation on MRI based on a convolutional neural network. Journal of Medical Imaging;5(2):021208.
Tian_2018_JMI [PubMed] [PDF] [DOI] -
Tade FI, Wiles WG, Lu G, Bilir B, Akin-Akintayo O, Lee JS, Patil D, Yu W, Gherasim CO, Fei BW (Corresponding author). Selective modification of fluciclovine (18F) transport in prostate carcinoma xenografts. Amino acids;50(9):1301-1305.
Tade_2018_Aminoacids [PDF] -
Halicek M, Little JV, Wang X, Patel M, Griffith CC, Chen AY, Fei BW (Corresponding author). Tumor margin classification of head and neck cancer using hyperspectral imaging and convolutional neural networks. Proceedings of SPIE: The International Society for Optical Engineering;10576.
Halicek_2018_MedImaging [PubMed] [PDF] [DOI] -
Guo R, Lu G, Qin B, Fei BW. Ultrasound imaging technologies for breast cancer detection and management: A review. Ultrasound in Medicine and Biology;44(1):37-70.
Guo_2018_Ultrasound [PubMed] [PDF] [DOI] -
Dormer JD, Guo R, Shen M, Jiang R, Wagner MB, Fei BW (Corresponding author). Ultrasound segmentation of rat hearts using convolutional neural networks. Proceedings of SPIE: The International Society for Optical Engineering;10580.
Dormer_2018_MedImaging_1 [PubMed] [PDF] [DOI] -
Ma L, Guo R, Zhang G, Schuster, DM, Fei BW (Corresponding author). “A Combined Learning Algorithm for Prostate Segmentation on 3D CT Images,” Medical Physics; 44(11): 5768-5781.
Ma_2017_MedPhys [PubMed] [PDF] [DOI] -
Sarno, A., Dance, DR., van Engen, RE., Young, KC., Russo, P., Di Lillo, F., Mettivier, G., Bliznakova, K., Fei, BW., Sechopoulos, I.(2017). “A Monte Carlo model for mean glandular dose evaluation in spot compression mammography.”Medical Physics 44(7): 3848-3860.
Sarno_2017_MedPhys [PubMed] [PDF] [DOI] -
Dormer JD, Jiang R, Wagner MB, Fei BW, A new method to quantify fiber orientation similarity in registered volumes “, Proc. SPIE 10136, Medical Imaging 2017: Image Perception, Observer Performance, and Technology Assessment, 101361I, March 10, 2017, Orlando, FL.
Dormer_2017_MedImaging1 [PubMed] [PDF] [DOI] -
Ma L, Guo R, Zhang G, Fei BW (Corresponding author). “A random walk‐based segmentation framework for 3D ultrasound images of the prostate,” Medical Physics, 2017 Jun 5. PubMed PMID:28582803.
Ma_2017_MedPhys_1 [PubMed] [PDF] -
Tian, ZQ., Liu, LZ., Zhang, ZF., Xue, JR., Fei, BW.(2017). “A supervoxel-based segmentation method for prostate MR images.”Medical Physics 44(2): 558-569.
Tian_2017_MedPhys [PubMed] [PDF] [DOI] -
Ma L, Guo R, Zhang G, Tade F, Schuster DM, Fei BW, Automatic segmentation of the prostate on CT images using deep learning and multi-atlas fusion, Proc. SPIE 10133, Medical Imaging 2017: Image Processing, 101332O, February 24, 2017, Orlando, FL.
Ma_2017_MedImaging_1 [PubMed] [PDF] [DOI] -
Fei BW (Corresponding author), Computer-aided diagnosis of prostate cancer with MRI, Current Opinion in Biomedical Engineering (In Press, Invited Review)
Fei_2017_CurrentBME [PubMed] [PDF] [DOI] -
Tian Z, Liu L, Fei BW, Deep convolutional neural network for prostate MR segmentation, Proc. SPIE 10135, Medical Imaging 2017: Image-Guided Procedures, Robotic Interventions, and Modeling, 101351L, March 3, 2017, Orlando, FL.
Tian_2017_MedImaging [PDF] -
Halicek, M., Lu, GL., Little, JV., Wang, X., Patel, M., Griffith, CC., El-Deiry, MW., Chen, A., Fei, BW.(2017). “Deep convolutional neural networks for classifying head and neck cancer using hyperspectral imaging.”Journal of Biomedical Optics 22(6): 4.
Halicek_2017_JBO [PubMed] [PDF] [DOI] -
Ma L, Lu G, Wang D, Wang X, Chen ZG, Fei BW. Deep learning-based classification for head and neck cancer detection with hyperspectral imaging in an animal model, Proc. SPIE 10137, Medical Imaging 2017: Biomedical Applications in Molecular, Structural, and Functional Imaging, 101372G, March 13, 2017, Orlando, FL.
Ma_2017_MedImaging [PubMed] [PDF] [DOI] -
Lu G, Zhang H, Wang X, Little J, Magliocca K, Chen A, Fei BW (Corresponding author).“Detection of head and neck cancer in surgical specimens using quantitative hyperspectral imaging,” Clinical Cancer Research. 2017 Jun 13. pii: clincanres.0906.2017. doi: 10.1158/1078-0432.CCR-17-0906. [Epub ahead of print] PubMed PMID:28611203.
Lu_2017_CCR [PubMed] [PDF] [DOI] -
Dormer JD, Meng Y, Zhang X, Jiang R, Wagner MB, Fei BW, Estimating cardiac fiber orientations in pig hearts using registered ultrasound and MR image volumes, Proc. SPIE 10139, Medical Imaging 2017: Ultrasonic Imaging and Tomography, 101391G, March 15, 2017, Orlando, FL.
Dormer_2017_MedImaging [PubMed] [PDF] [DOI] -
Fei BW, Lu G, Halicek M, Wang X, Zhang HZ, Little JV, Magliocca K, Patel MR, Griffith CC, El-Diery MW. Label-free hyperspectral imaging and quantification methods for surgical margin assessment of tissue specimens of cancer patients. 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC):4041-4045.
Fei_2017_IEEE [PubMed] [PDF] [DOI] -
Fei BW, Lu G, Wang X, Zhang HZ, Little JV, Patel MR, Griffith CC, El-Diery MW, Chen AY. Label-free reflectance hyperspectral imaging for tumor margin assessment: a pilot study on surgical specimens of cancer patients. Journal of Biomedical Optics;22(8):086009.
Fei_2017_JBO [PubMed] [PDF] [DOI] -
Ma L, Liu X, Fei BW (Corresponding author). Learning with distribution of optimized features for recognizing common CT imaging signs of lung diseases, Physics in Medicine and Biology 2017, 62:612-632.
Ma_2017_PMB [PubMed] [PDF] [DOI] -
Li RF, Wang YB, Xu H, Fei BW, Qin BJ. Micro-Droplet Detection Method for Measuring the Concentration of Alkaline Phosphatase-Labeled Nanoparticles in Fluorescence Microscopy. Sensors;17(11):2685.
Li_2017_Sensors [PubMed] [PDF] [DOI] -
Webster RJ, Fei BW, Nahlawi L, Goncalves C, Imani F, Gaed M, Gomez JA, Moussa M, Gibson E, Fenster A. Models of temporal enhanced ultrasound data for prostate cancer diagnosis: the impact of time-series order. Proceedings of SPIE 2017;10135.
Webster_2017_SPIE [PDF] -
Fei BW (Corresponding author), Nieh P, Master V, Zhang Y, Osunkoya A, Schuster DM. Molecular imaging and fusion targeted biopsy of the prostate, Clinical and Translational Imaging 2017, 5:29-43. (Invited Paper)
Fei_2017_CTI [PubMed] [PDF] [DOI] -
Fei, B. W. and D. M. Schuster(2017). “PET Molecular Imaging–Directed Biopsy: A Review.”American Journal of Roentgenology: 1-15.
Fei_2017_AJR [PubMed] [PDF] [DOI] -
Fei, BW., Nieh, P., Master, V., Alemozaffar, M., Tade, F., Akin-Akintayo, O., Osunkoya, A., Goodman, M., Schuster, D.(2017). “PET/Ultrasound fusion targeted biopsy of the prostate: initial clinical results.”Journal of Nuclear Medicine 58: 1.
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Fei BW, Lu G, Wang X, Zhang H, Little JV, Magliocca KR, Chen AY, Tumor margin assessment of surgical tissue specimen of cancer patients using label-free hyperspectral imaging, Proc. SPIE 10054, Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems XV, 100540E, February 14, 2017, San Francisco, CA.
Fei_2017_SPIE [PubMed] [PDF] [DOI] -
Ma L, Guo R, Tian Z, Venkataraman R, Sarkar S, Liu X, Tade F, Schuster DM, Fei BW (Corresponding author). Combining population and patient-specific characteristics for prostate segmentation on 3D CT images. Proceedings of SPIE – The International Society for Optical Engineering 2016; 9784:978427. PubMed PMID:27660382.
Ma_2016_MedImaging [PubMed] [PDF] -
Liu L, Tian Z, Zhang Z, Fei BW (Corresponding author). Computer-aided detection of prostate cancer with MRI: technology and applications.Academic Radiology 2016; 23:1024-46.
Liu_2016_AcadRadiology [PubMed] [PDF] [DOI] -
Dormer J, Qin X, Shen M, Wang S, Zhang X, Jiang R, Wagner MB, Fei BW (Corresponding author). Determining cardiac fiber orientation using FSL and registered ultrasound/DTI volumes. Proceedings of SPIE – The International Society for Optical Engineering 2016; 9790: 979015. PubMed PMID:27660384.
Dormer_2016_MedImaging [PubMed] [PDF] -
Lu G, Qin X, Wang D, Muller S, Zhang H, Chen A, Chen ZG, Fei BW (Corresponding author). Hyperspectral imaging of neoplastic progression in a mouse model of oral carcinogenesis. Proceedings of SPIE – The International Society for Optical Engineering 2016; 9788:978812. PubMed PMID:27656034.
Lu_2016_MedImaging [PubMed] [PDF] -
Wei KK, Su HF, Zhou GF, Zhang R, Cai PQ, Fan Y, Xie CM, Fei BW, Zhang ZF. Potential application of radiomics for differentiating solitary pulmonary nodules. OMICS Journal of Radiology;5(2).
Wei_2016_OMICS [PubMed] [PDF] [DOI] -
Lu G, Qin X, Wang D, Muller S, Zhang H, Chen A, Chen ZG, Fei BW (Corresponding author). Quantitative diagnosis of tongue cancer from histological images in an animal model. Proceedings of SPIE – The International Society for Optical Engineering 2016; 9791: 97910L. PubMed PMID:27656036.
Lu_2016_MedImaging_1 [PubMed] [PDF] -
Ma L, Guo R, Tian Z, Venkataraman R, Sarkar S, Liu X, Nieh PT, Master VV, Schuster DM, Fei BW (Corresponding author). Random walk based segmentation for the prostate on 3D transrectal ultrasound images. Proceedings of SPIE – The International Society for Optical Engineering 2016; 9786:978607. PubMed PMID:27660383.
Ma_2016_MedImaging_1 [PubMed] [PDF] [DOI] -
Tian Z, Liu L, Zhang Z, Fei BW (Corresponding author). “Superpixel-based segmentation for 3D prostate MR images.” IEEE Transactions on Medical Imaging; 35(3):791-801.
Tian_2016_IEEE [PubMed] [PDF] [DOI] -
Chung H, Lu G, Tian Z, Wang D, Chen ZG, Fei BW (Corresponding author). Superpixel-based spectral classification for the detection of head and neck cancer with hyperspectral imaging. Proceedings of SPIE – The International Society for Optical Engineering 2016; 9788:978813. PubMed PMID:27656035.
Chung_2016_MedImaging [PubMed] [PDF] -
Qin X, Wang S, Shen M, Zhang X, Lerakis S, Wagner MB, Fei BW (Corresponding author). 3D in vivo imaging of rat hearts by high frequency ultrasound and its application in myofiber orientation wrapping. Proceedings of SPIE – The International Society for Optical Engineering 2015; 9419:941906. PubMed PMID:26412926.
Qin_2015_MedImaging_1 [PubMed] [PDF] -
Tian Z, Liu L, Fei BW (Corresponding author). A fully automatic multi-atlas based segmentation method for prostate MR images. Proceedings of SPIE – The International Society for Optical Engineering 2015; 9413:941340. PubMed PMID:26798187.
Tian_2015_MedImaging_1 [PubMed] [PDF] -
Pike R, Lu G, Wang D, Chen ZG, Fei BW (Corresponding author). A minimum spanning forest based classification method for dedicated breast CT images. Medical Physics 2015; 42:6190-202.
Pike_2015_IEEE [PubMed] [PDF] [DOI] -
Pike R, Sechopoulos I, Fei BW (Corresponding author). A minimum spanning forest-based method for noninvasive cancer detection wtih hyperspectral imaging. IEEE Transactions on Biomedical Engineering 2015; 63(3):653-663.
Pike_2015_MedPhys [PubMed] [PDF] [DOI] -
Tian Z, Liu L, Fei BW (Corresponding author). A supervoxel-based segmentation method for prostate MR images. Proceedings of SPIE – The International Society for Optical Engineering 2015; 9413:941318. PubMed PMID:26848206.
Tian_2015_MedImaging [PubMed] [PDF] [DOI] -
Qin X, Fei BW (Corresponding author). DTI template-based estimation of cardiac fiber orientations from 3D ultrasound. Medical Physics 2015; 42:2915.
Qin_2015_MedPhys_1 [PubMed] [PDF] [DOI] -
Lu G, Qin X, Wang D, Chen ZG, Fei BW (Corresponding author). Estimation of tissue optical parameters with hyperspectral imaging and spectral unmixing. Proceedings of SPIE – The International Society for Optical Engineering 2015; 9417:94170Q. PubMed PMID:26855467.
Lu_2015_MedImaging_1 [PubMed] [PDF] -
Lu G, Wang D, Qin X, Halig L, Muller S, Zhang H, Chen A, Pogue BW, Chen ZG, Fei BW (Corresponding author). Framework for hyperspectral image processing and quantification for cancer detection during animal tumor surgery. Journal of Biomedical Optics 2015; 20:126012.
Lu_2015_JBO [PubMed] [PDF] [DOI] -
Lu G, Qin X, Wang D, Chen ZG, Fei BW (Corresponding author). Quantitative wavelength analysis and image classification for intraoperative cancer diagnosis with hyperspectral imaging. Proceedings of SPIE – The International Society for Optical Engineering 2015; 9415: 94151B. PubMed PMID:26523083.
Lu_2015_MedImaging [PubMed] [PDF] -
Qin X, Wang S, Shen M, Zhang X, Lerakis S, Wagner MB, Fei BW (Corresponding author). Register cardiac fiber orientations from 3D DTI volume to 2D ultrasound image of rat hearts. Proceedings of SPIE – The International Society for Optical Engineering 2015; 9415:94152M. PubMed PMID:26855466.
Qin_2015_MedImaging [PubMed] [PDF] -
Qin X, Wang S, Shen M, Lu G, Zhang X, Wagner MB, Fei BW (Corresponding author). Simulating cardiac ultrasound image based on MR diffusion tensor imaging. Medical Physics 2015; 42:5144-56.
Qin_2015_MedPhys [PubMed] [PDF] [DOI]